C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prostate tumor overexpressed 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000599732 PTOV1-006 ENSG00000104960 9606 + 19:49851191-49860744 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungMusclePlacentaENST00000599732
Transcript ID Brain Colon Heart Liver Lung Muscle Placenta
ENST00000599732 4.545±0.00 25.978±0.00 20.473±0.00 11.367±0.00 44.176±0.00 27.619±21.11 37.999±5.91

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046575 Ptov1-001 protein_coding Mus_musculus 0 1591
ENSMUST00000152198 Ptov1-003 nonsense_mediated_decay Mus_musculus 0 747
ENSMUST00000132521 Ptov1-006 retained_intron Mus_musculus 0 721
ENSMUST00000132707 Ptov1-004 processed_transcript Mus_musculus 0 597
ENSMUST00000003049 Med25-201 protein_coding Mus_musculus 0 433
ENSMUST00000145684 Ptov1-008 retained_intron Mus_musculus 0 375
ENSMUST00000140732 Ptov1-002 retained_intron Mus_musculus 0 322
ENSMUST00000153085 Ptov1-009 retained_intron Mus_musculus 0 305

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