C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 30
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000601142 ZNF30-003 ENSG00000168661 9606 + 19:34927044-34945009 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000601142
Transcript ID Brain Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000601142 0.357±0.00 0.179±0.02 0.655±0.00 0.370±0.10 0.043±0.00 0.151±0.07 0.087±0.00 0.264±0.00 0.454±0.20

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057652 Zfp420-001 protein_coding Mus_musculus 0 224
ENSMUST00000145952 Zfp420-003 processed_transcript Mus_musculus 0 224
ENSMUST00000074876 Zfp420-002 protein_coding Mus_musculus 0 224
ENSMUST00000077787 Zfp14-201 protein_coding Mus_musculus 2e-27 128
ENSMUST00000075263 Zfp26-004 retained_intron Mus_musculus 5e-24 117
ENSMUST00000098970 Zfp26-002 retained_intron Mus_musculus 5e-24 117
ENSMUST00000159569 Zfp26-001 protein_coding Mus_musculus 5e-24 117
ENSMUST00000182746 Gm26920-001 nonsense_mediated_decay Mus_musculus 5e-24 117
ENSMUST00000182546 Zfp82-006 protein_coding Mus_musculus 5e-24 117
ENSMUST00000080834 Zfp82-001 protein_coding Mus_musculus 5e-24 117
ENSMUST00000182483 Zfp82-003 retained_intron Mus_musculus 5e-24 117
ENSMUST00000183025 Zfp82-007 retained_intron Mus_musculus 5e-24 117
ENSMUST00000130458 Zfp963-001 protein_coding Mus_musculus 5e-24 117
ENSMUST00000110216 Zfp930-201 protein_coding Mus_musculus 9e-22 110
ENSMUST00000120767 Gm13788-001 processed_pseudogene Mus_musculus 2e-18 99
ENSMUST00000078257 D130040H23Rik-201 protein_coding Mus_musculus 2e-18 99
ENSMUST00000133515 Zfp606-004 retained_intron Mus_musculus 0.0000000000002 82
ENSMUST00000151933 Zfp606-003 protein_coding Mus_musculus 0.0000000000002 82
ENSMUST00000098822 Zfp606-001 protein_coding Mus_musculus 0.0000000000002 82
ENSMUST00000165906 Gm4924-201 protein_coding Mus_musculus 0.0000000000002 82
ENSMUST00000108331 Zfp59-201 protein_coding Mus_musculus 0.0000000000007 81
ENSMUST00000060063 Zfp846-201 protein_coding Mus_musculus 0.000000000002 79
ENSMUST00000140668 Zfp846-001 nonsense_mediated_decay Mus_musculus 0.000000000002 79
ENSMUST00000115557 Zfp846-002 protein_coding Mus_musculus 0.000000000002 79
ENSMUST00000186619 2610044O15Rik8-002 protein_coding Mus_musculus 0.000000000009 77
ENSMUST00000166005 Zfp426-201 protein_coding Mus_musculus 0.0000000004 71
ENSMUST00000163348 Zfp426-012 protein_coding Mus_musculus 0.0000000004 71
ENSMUST00000080386 Zfp426-002 protein_coding Mus_musculus 0.0000000004 71
ENSMUST00000169558 Zfp426-004 protein_coding Mus_musculus 0.0000000004 71
ENSMUST00000167457 Zfp426-003 protein_coding Mus_musculus 0.0000000004 71
ENSMUST00000115562 Zfp426-001 protein_coding Mus_musculus 0.0000000004 71
ENSMUST00000168095 Zfp426-008 nonsense_mediated_decay Mus_musculus 0.0000000004 71
ENSMUST00000080987 Zfp869-201 protein_coding Mus_musculus 0.0000000004 71
ENSMUST00000079237 Zfp125-201 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000086281 Zfp599-001 protein_coding Mus_musculus 0.0000009 60
ENSMUST00000098550 Zfp791-201 protein_coding Mus_musculus 0.0000009 60

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