C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ribosomal protein S19 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000601492  |
RPS19-003 |
ENSG00000105372 |
9606 | + |
19:41860255-41869084  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003WP | CIL_0003WP_0001 | CGP | 19:41844743-41872926 |
| CIL_0003W3 | CIL_0003W3_0001 | CGP | 19:41859918-41881372 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003735 | IEA | structural constituent of ribosome |
| GO:0005622 | IEA | intracellular |
| GO:0005840 | IEA | ribosome |
| GO:0006412 | IEA | translation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000129847
|
Rps19-004 | nonsense_mediated_decay | Mus_musculus | 0 | 329 |
|
ENSMUST00000108430
|
Rps19-001 | protein_coding | Mus_musculus | 0 | 327 |
|
ENSMUST00000108428
|
Rps19-003 | protein_coding | Mus_musculus | 0 | 322 |
|
ENSMUST00000181233
|
Rps19-ps6-001 | processed_pseudogene | Mus_musculus | 0 | 268 |
|
ENSMUST00000156372
|
Rps19-007 | protein_coding | Mus_musculus | 0 | 268 |
|
ENSMUST00000124035
|
Rps19-008 | protein_coding | Mus_musculus | 0 | 265 |
|
ENSMUST00000108429
|
Rps19-006 | protein_coding | Mus_musculus | 0 | 265 |
|
ENSMUST00000153451
|
Rps19-005 | protein_coding | Mus_musculus | 0 | 265 |
|
ENSMUST00000091925
|
Rps19-ps4-001 | processed_pseudogene | Mus_musculus | 0 | 263 |
|
ENSMUST00000168472
|
Rps19-ps1-001 | processed_pseudogene | Mus_musculus | 0 | 263 |
|
ENSMUST00000100614
|
Rps19-ps2-001 | processed_pseudogene | Mus_musculus | 0 | 263 |
|
ENSMUST00000116122
|
Rps19-ps7-001 | processed_pseudogene | Mus_musculus | 0 | 257 |
|
ENSMUST00000159750
|
Rps19-ps10-001 | processed_pseudogene | Mus_musculus | 0 | 243 |
|
ENSMUST00000116174
|
Rps19-ps3-001 | processed_pseudogene | Mus_musculus | 0 | 213 |
|
ENSMUST00000160308
|
Rps19-ps11-001 | processed_pseudogene | Mus_musculus | 0 | 204 |
|
ENSMUST00000161787
|
Rps19-ps9-001 | processed_pseudogene | Mus_musculus | 0 | 196 |
|
ENSMUST00000180714
|
Rps19-ps8-001 | processed_pseudogene | Mus_musculus | 0 | 195 |
|
ENSMUST00000138662
|
Rps19-002 | retained_intron | Mus_musculus | 1.4013e-45 | 185 |
|
ENSMUST00000180745
|
Rps19-ps5-001 | processed_pseudogene | Mus_musculus | 1e-32 | 143 |
