C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase type IVA, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000602725 PTP4A2-019 ENSG00000184007 9606 - 1:31906421-31919483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000602725
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000602725 51.412±0.00 31.310±0.00 3.696±0.00 16.757±2.22 38.882±0.00 14.684±0.00 11.966±0.00 9.012±6.19 5.889±0.61 19.272±0.00 23.636±14.88 27.678±11.46 19.855±17.33 23.457±5.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0001 VISTA 1:31744429-32345312

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0004727 TAS prenylated protein tyrosine phosphatase activity
GO:0005737 IDA cytoplasm
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0006470 IEA protein dephosphorylation
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000165853 Ptp4a2-201 protein_coding Mus_musculus 0 1677
ENSMUST00000030578 Ptp4a2-001 protein_coding Mus_musculus 0 1677
ENSMUST00000141754 Ptp4a2-006 processed_transcript Mus_musculus 0 832
ENSMUST00000118834 Gm13422-001 processed_pseudogene Mus_musculus 0 760
ENSMUST00000136880 Gm11780-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000133662 Ptp4a2-005 processed_transcript Mus_musculus 0 289
ENSMUST00000132386 Ptp4a2-003 processed_transcript Mus_musculus 4e-22 111

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