C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603164 AC005776.1-001 ENSG00000270802 9606 + 19:15338948-15339237 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLungMuscleOvaryPlacentaTestisENST00000603164
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Lung Muscle Ovary Placenta Testis
ENST00000603164 0.130±0.00 0.222±0.00 0.631±0.29 0.085±0.00 0.080±0.00 0.688±0.00 0.040±0.00 0.079±0.00 0.321±0.07 0.134±0.00 0.451±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043N CIL_00043N_0001 CGP 19:15235519-15379798

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000185285 RP23-424E19.1-001 processed_pseudogene Mus_musculus 0.00000003 62
ENSMUST00000120348 Gm12123-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000117461 Gm14657-001 processed_pseudogene Mus_musculus 7.9874e-44 180
ENSMUST00000120458 Gm7071-001 processed_pseudogene Mus_musculus 3e-30 135
ENSMUST00000117861 Gm12760-001 processed_pseudogene Mus_musculus 9.94922e-44 180
ENSMUST00000120018 Gm13518-001 processed_pseudogene Mus_musculus 4.00001e-41 171
ENSMUST00000119221 Gm12934-001 processed_pseudogene Mus_musculus 6e-16 88

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