C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000603675 RP11-33A14.3-001 ENSG00000271131 9606 - 3:178493327-178493810 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleTestisENST00000603675
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Testis
ENST00000603675 0.085±0.00 0.030±0.00 0.756±0.00 0.274±0.00 0.054±0.00 0.051±0.00 0.203±0.00 0.052±0.00 0.054±0.00 0.050±0.00 0.027±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FI CIL_0001FI_0001 CGP 3:178419123-179072279

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 553
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 538
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 531
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 518
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 510
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 508
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 497
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 488
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 401
ENSDART00000010052 ppifa-001 protein_coding Danio_rerio 1.99965e-42 176
ENSDART00000144417 ppifa-002 protein_coding Danio_rerio 5e-38 161

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