C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor receptor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000604236 FGFR2-024 ENSG00000066468 9606 - 10:121479227-121598413 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLungENST00000604236
Transcript ID Heart Lung
ENST00000604236 0.089±0.00 2.055±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0001 CGP 10:120851175-121598458
CIL_0007TN CIL_0007TN_0001 VISTA 10:121051688-121653399
CIL_0001BE CIL_0001BE_0001 CGP 10:121478334-121928801

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005007 IEA fibroblast growth factor-activated receptor activity
GO:0005515 IEA protein binding
GO:0008543 IEA fibroblast growth factor receptor signaling pathway
GO:0048701 IEA embryonic cranial skeleton morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117872 Fgfr2-002 protein_coding Mus_musculus 0 2809
ENSMUST00000153166 Fgfr2-001 nonsense_mediated_decay Mus_musculus 0 2590
ENSMUST00000122054 Fgfr2-004 protein_coding Mus_musculus 0 2331
ENSMUST00000117754 Fgfr2-009 protein_coding Mus_musculus 0 2161
ENSMUST00000119260 Fgfr2-011 protein_coding Mus_musculus 0 2122
ENSMUST00000120187 Fgfr2-003 protein_coding Mus_musculus 0 2073
ENSMUST00000117073 Fgfr2-020 protein_coding Mus_musculus 0 1962
ENSMUST00000117691 Fgfr2-013 protein_coding Mus_musculus 0 1903
ENSMUST00000121064 Fgfr2-008 protein_coding Mus_musculus 0 1903
ENSMUST00000120715 Fgfr2-010 protein_coding Mus_musculus 0 1901
ENSMUST00000117357 Fgfr2-016 protein_coding Mus_musculus 0 1864
ENSMUST00000120141 Fgfr2-015 protein_coding Mus_musculus 0 1864
ENSMUST00000117089 Fgfr2-012 protein_coding Mus_musculus 0 1864
ENSMUST00000121080 Fgfr2-019 protein_coding Mus_musculus 0 1742
ENSMUST00000118296 Fgfr2-018 protein_coding Mus_musculus 0 1742
ENSMUST00000117858 Fgfr2-014 protein_coding Mus_musculus 0 1742
ENSMUST00000122448 Fgfr2-017 protein_coding Mus_musculus 0 1703
ENSMUST00000124096 Fgfr2-007 protein_coding Mus_musculus 0 1519
ENSDART00000080916 fgfr2-202 protein_coding Danio_rerio 0 760
ENSDART00000149125 fgfr2-002 protein_coding Danio_rerio 0 760
ENSDART00000098269 fgfr2-003 protein_coding Danio_rerio 0 760
ENSMUST00000129542 Fgfr2-025 retained_intron Mus_musculus 0 741
ENSDART00000150061 fgfr2-005 protein_coding Danio_rerio 0 726
ENSDART00000080914 fgfr2-201 protein_coding Danio_rerio 0 688
ENSDART00000149602 fgfr2-004 protein_coding Danio_rerio 0 688
ENSMUST00000133806 Fgfr2-022 retained_intron Mus_musculus 0 660
ENSMUST00000127091 Fgfr2-021 nonsense_mediated_decay Mus_musculus 0 580
ENSMUST00000136264 Fgfr2-026 retained_intron Mus_musculus 0 516
ENSMUST00000130557 Fgfr2-027 retained_intron Mus_musculus 0 505
ENSDART00000125883 fgfr3-202 protein_coding Danio_rerio 0 472
ENSDART00000013534 fgfr3-201 protein_coding Danio_rerio 0 472
ENSMUST00000148675 Fgfr2-023 retained_intron Mus_musculus 0 460
ENSDART00000067689 fgfr1b-201 protein_coding Danio_rerio 0 446
ENSDART00000075259 fgfr1b-202 protein_coding Danio_rerio 0 436
ENSMUST00000147859 Fgfr2-024 retained_intron Mus_musculus 0 424
ENSMUST00000129103 Fgfr2-005 retained_intron Mus_musculus 0 300

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