C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000605745 RP11-108K3.5-001 ENSG00000270378 9606 - 15:51351100-51351192 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastENST00000605745
Transcript ID Brain Breast
ENST00000605745 0.248±0.00 0.246±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YR CIL_0007YR_0001 VISTA 15:51100773-51703779
CIL_000507 CIL_000507_0002 CGP 15:51208057-51408013
CIL_000506 CIL_000506_0002 CGP 15:51341629-51622833

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121439 Gm12936-001 processed_pseudogene Mus_musculus 3e-22 106
ENSMUST00000120093 Rpl36a-ps3-001 processed_pseudogene Mus_musculus 3e-18 94
ENSMUST00000054544 Rpl36al-001 protein_coding Mus_musculus 3e-18 94
ENSMUST00000110619 Rpl36al-002 protein_coding Mus_musculus 3e-18 94
ENSMUST00000110620 Rpl36al-003 protein_coding Mus_musculus 3e-18 94

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