C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: paired-like homeodomain 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000607868 PITX2-009 ENSG00000164093 9606 - 4:110617429-110618826 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartLungOvaryPlacentaTestisENST00000607868
Transcript ID Adipose Breast Heart Lung Ovary Placenta Testis
ENST00000607868 0.048±0.00 0.440±0.07 0.018±0.00 0.479±0.00 0.180±0.19 19.797±0.00 0.737±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000917 CIL_000917_0001 VISTA 4:110309018-110909617
CIL_000912 CIL_000912_0001 VISTA 4:110357117-110957671
CIL_0007ZJ CIL_0007ZJ_0001 VISTA 4:110448103-111050012
CIL_0007RD CIL_0007RD_0001 VISTA 4:110613299-111214576

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042587 Pitx2-003 protein_coding Mus_musculus 0 1679
ENSMUST00000106382 Pitx2-001 protein_coding Mus_musculus 0 1679
ENSMUST00000174661 Pitx2-002 protein_coding Mus_musculus 0 1679
ENSMUST00000029657 Pitx2-005 protein_coding Mus_musculus 0 1666
ENSMUST00000172645 Pitx2-006 protein_coding Mus_musculus 0 828

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