C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 24, type 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610348 CDH24-203 ENSG00000139880 9606 - 14:23047062-23057538 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyMusclePlacentaENST00000610348
Transcript ID Bladder Brain Kidney Muscle Placenta
ENST00000610348 0.466±0.00 0.691±0.00 0.564±0.00 0.066±0.00 0.230±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MR CIL_0006MR_0001 CGP 14:23042167-23057538

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000067784 Cdh24-201 protein_coding Mus_musculus 0 861
ENSMUST00000173083 Gm20726-201 protein_coding Mus_musculus 0 309
ENSDART00000111261 protein_coding Danio_rerio 2e-27 128
ENSDART00000138769 protein_coding Danio_rerio 2e-27 128
ENSDART00000002279 cdh11-201 protein_coding Danio_rerio 0.0000000000002 82
ENSDART00000127332 cdh11-001 protein_coding Danio_rerio 0.0000008 60

Loading