| Transcript ID | Ovary |
|---|---|
| ENST00000610970 | 2.796±0.45 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | homeobox A4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000610970  |
HOXA4-202 |
ENSG00000197576 |
9606 | - |
7:27128507-27130780  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007OD | CIL_0007OD_0002 | UCNEbase | 7:26506344-27606703 |
| CIL_0008QL | CIL_0008QL_0001 | VISTA | 7:26816432-27417045 |
| CIL_000911 | CIL_000911_0001 | VISTA | 7:26910239-27511438 |
| CIL_000811 | CIL_000811_0001 | VISTA | 7:26948649-27549872 |
| CIL_00097P | CIL_00097P_0001 | VISTA | 7:27075631-27678581 |
| CIL_0003PB | CIL_0003PB_0001 | CGP | 7:27128507-27143668 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0009653 | TAS | anatomical structure morphogenesis |
| GO:0043565 | IEA | sequence-specific DNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000101395
|
Hoxa4-001 | protein_coding | Mus_musculus | 0 | 678 |
|
ENSMUST00000055334
|
Hoxb3-001 | protein_coding | Mus_musculus | 5e-18 | 97 |
|
ENSMUST00000093944
|
Hoxb3-002 | protein_coding | Mus_musculus | 5e-18 | 97 |
|
ENSMUST00000053932
|
HOXD3-001 | nonsense_mediated_decay | Mus_musculus | 5e-18 | 97 |
|
ENSMUST00000190553
|
Hoxd3-008 | retained_intron | Mus_musculus | 5e-18 | 97 |
|
ENSMUST00000140666
|
Hoxd3-007 | protein_coding | Mus_musculus | 5e-18 | 97 |
|
ENSMUST00000047830
|
Hoxd3-005 | protein_coding | Mus_musculus | 5e-18 | 97 |
|
ENSMUST00000111982
|
Hoxd3-004 | protein_coding | Mus_musculus | 5e-18 | 97 |
|
ENSMUST00000111983
|
Hoxd3-001 | protein_coding | Mus_musculus | 5e-18 | 97 |
|
ENSMUST00000100523
|
Hoxb2-001 | protein_coding | Mus_musculus | 0.00000000002 | 75 |
|
ENSMUST00000182030
|
Hoxb2-002 | retained_intron | Mus_musculus | 0.00000000002 | 75 |
|
ENSDART00000015333
|
gbx2-001 | protein_coding | Danio_rerio | 0.00003 | 55 |
