C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major histocompatibility complex, class II, DR beta 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611060 HLA-DRB1-201 ENSG00000196126 9606 - 6:32552990-32589805 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000611060
Transcript ID Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000611060 30.207±9.47 7.903±4.31 3.741±0.00 6.595±0.00 5.863±3.53 26.863±0.00 4.685±0.00 8.246±5.26 9.331±0.00 2.588±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001PK CIL_0001PK_0002 CGP 6:32517343-32589848
CIL_0002XS CIL_0002XS_0008 CGP 6:32552990-32647062

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006955 IEA immune response
GO:0016020 IEA membrane
GO:0019882 IEA antigen processing and presentation
GO:0042613 IEA MHC class II protein complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074557 H2-Eb1-001 protein_coding Mus_musculus 0 676

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