C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611124 SNX9-201 ENSG00000130340 9606 + 6:157867249-157945077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverMuscleOvaryENST00000611124
Transcript ID Bladder Brain Breast Kidney Liver Muscle Ovary
ENST00000611124 0.614±0.00 1.939±0.00 2.106±0.00 2.806±0.00 6.282±0.00 1.613±0.00 9.880±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00055E CIL_00055E_0001 CGP 6:157381133-157945077
CIL_00055D CIL_00055D_0001 CGP 6:157700387-158099176

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007067 IEA mitotic nuclear division
GO:0015031 IEA protein transport
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002436 Snx9-201 protein_coding Mus_musculus 0 2080
ENSDART00000104476 snx9a-001 protein_coding Danio_rerio 0 374
ENSDART00000098593 snx9a-003 retained_intron Danio_rerio 0 235

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