C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nudix (nucleoside diphosphate linked moiety X)-type motif 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611621 NUDT18-003 ENSG00000275074 9606 - 8:22106872-22109397 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000611621
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000611621 4.816±0.00 3.683±0.00 0.059±0.00 2.316±1.34 3.282±2.77 2.340±1.20 0.980±0.00 3.586±0.00 2.163±0.00 2.331±1.29 0.841±0.00 2.450±1.27 3.629±1.10 5.127±2.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000810 CIL_000810_0001 VISTA 8:21687877-22288944
CIL_0008ZI CIL_0008ZI_0001 VISTA 8:21743578-22344815
CIL_000812 CIL_000812_0001 VISTA 8:21749915-22350771

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IDA magnesium ion binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0016787 IEA hydrolase activity
GO:0034656 TAS nucleobase-containing small molecule catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044715 IDA 8-oxo-dGDP phosphatase activity
GO:0044716 IDA 8-oxo-GDP phosphatase activity
GO:0044717 IDA 8-hydroxy-dADP phosphatase activity
GO:0046057 IDA dADP catabolic process
GO:0046067 IDA dGDP catabolic process
GO:0046712 IDA GDP catabolic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089049 Nudt18-201 protein_coding Mus_musculus 0 885

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