C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leprecan-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612048 LEPREL2-003 ENSG00000110811 9606 + 12:6829828-6839846 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverLungOvaryPlacentaTestisENST00000612048
Transcript ID Adipose Adrenal Breast Colon Liver Lung Ovary Placenta Testis
ENST00000612048 4.998±0.00 6.687±0.00 1.606±0.90 8.182±0.00 0.617±0.00 0.138±0.00 32.776±9.94 7.530±0.88 9.287±6.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XS CIL_0003XS_0002 CGP 12:6828410-6847393

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023958 Leprel2-001 protein_coding Mus_musculus 0 1855
ENSMUST00000135127 Leprel2-002 nonsense_mediated_decay Mus_musculus 0 1253
ENSMUST00000147296 Leprel2-006 retained_intron Mus_musculus 0 497
ENSMUST00000129225 Leprel2-004 retained_intron Mus_musculus 0 479
ENSMUST00000149870 Leprel2-005 retained_intron Mus_musculus 0 359
ENSMUST00000126987 Leprel2-007 retained_intron Mus_musculus 0 316
ENSMUST00000135546 Leprel2-003 retained_intron Mus_musculus 0.00000002 66
ENSMUST00000085555 Diexf-201 protein_coding Mus_musculus 0.0001 53
ENSMUST00000142184 Atxn7l1-014 protein_coding Mus_musculus 0.0001 53
ENSMUST00000125192 Atxn7l1-001 protein_coding Mus_musculus 0.0001 53
ENSMUST00000146040 Atxn7l1-002 protein_coding Mus_musculus 0.0001 53

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