C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: THAP domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612200 THAP4-201 ENSG00000176946 9606 - 2:241584428-241633364 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonKidneyLungMuscleENST00000612200
Transcript ID Adipose Breast Colon Kidney Lung Muscle
ENST00000612200 26.620±0.00 18.916±0.00 15.249±0.00 22.007±0.00 12.861±0.00 7.212±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004U9 CIL_0004U9_0002 CGP 2:241558721-241637449
CIL_0003ST CIL_0003ST_0001 CGP 2:241584405-241673857

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190116 Thap4-001 protein_coding Mus_musculus 0 691
ENSMUST00000189173 Thap4-003 retained_intron Mus_musculus 0 606
ENSMUST00000189472 Thap4-005 protein_coding Mus_musculus 0 348
ENSMUST00000112905 Thap4-002 nonsense_mediated_decay Mus_musculus 0 281
ENSMUST00000189728 Thap4-006 processed_transcript Mus_musculus 0 281
ENSMUST00000187445 Thap4-004 nonsense_mediated_decay Mus_musculus 2e-40 171

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