C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613083 CTD-3018O17.6-001 ENSG00000278543 9606 - 19:52473336-52475239 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyLiverMuscleOvaryTestisENST00000613083
Transcript ID Brain Breast Heart Kidney Liver Muscle Ovary Testis
ENST00000613083 0.024±0.01 0.014±0.00 0.007±0.00 0.019±0.00 0.200±0.00 0.026±0.00 0.021±0.01 0.033±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006L8 CIL_0006L8_0008 CGP 19:52429187-52512154
CIL_0004HA CIL_0004HA_0002 CGP 19:52453576-52564464

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075775 Rex2-001 protein_coding Mus_musculus 0 267
ENSMUST00000183129 Gm26996-001 unprocessed_pseudogene Mus_musculus 0 263
ENSMUST00000168483 Zfp600-201 protein_coding Mus_musculus 0 254
ENSMUST00000092750 Zfp600-001 protein_coding Mus_musculus 0 254
ENSMUST00000105738 Gm13242-001 protein_coding Mus_musculus 0 235
ENSMUST00000105741 Gm13225-002 protein_coding Mus_musculus 0 213
ENSMUST00000105742 Gm13225-003 protein_coding Mus_musculus 0 213
ENSMUST00000088765 Zfp758-201 protein_coding Mus_musculus 0 209
ENSMUST00000149699 Zfp758-003 protein_coding Mus_musculus 0 209
ENSMUST00000121315 Zfp758-001 protein_coding Mus_musculus 0 209
ENSMUST00000072477 Zfp758-002 protein_coding Mus_musculus 0 209
ENSMUST00000172177 Zfp40-201 protein_coding Mus_musculus 0 207
ENSMUST00000140313 Zfp40-002 protein_coding Mus_musculus 0 207
ENSMUST00000037057 Zfp40-001 protein_coding Mus_musculus 0 207
ENSMUST00000088811 Zfp160-201 protein_coding Mus_musculus 0 207
ENSMUST00000039577 Zfp51-201 protein_coding Mus_musculus 0 200
ENSMUST00000182397 Gm20997-001 unprocessed_pseudogene Mus_musculus 0 198
ENSMUST00000079242 Zfp52-201 protein_coding Mus_musculus 0 198
ENSMUST00000076664 Zfp53-201 protein_coding Mus_musculus 0 191
ENSMUST00000179996 Gm4944-201 protein_coding Mus_musculus 0 191
ENSMUST00000179175 Gm13247-201 protein_coding Mus_musculus 3.00004e-41 174
ENSMUST00000105735 Gm13247-001 protein_coding Mus_musculus 3.00004e-41 174
ENSMUST00000091879 Zfp942-001 protein_coding Mus_musculus 1e-39 169
ENSMUST00000074295 Zfp942-201 protein_coding Mus_musculus 2e-38 165
ENSMUST00000108007 Gm20939-201 protein_coding Mus_musculus 5e-38 163
ENSMUST00000182643 Gm26919-001 protein_coding Mus_musculus 2e-37 161
ENSMUST00000189515 RP24-229N16.1-001 unprocessed_pseudogene Mus_musculus 4e-34 150
ENSMUST00000183125 Zfp386-002 protein_coding Mus_musculus 6e-33 147
ENSMUST00000073551 Zfp386-001 protein_coding Mus_musculus 6e-33 147
ENSMUST00000174407 Zfp141-001 protein_coding Mus_musculus 7e-32 143
ENSMUST00000183072 Gm27047-001 unprocessed_pseudogene Mus_musculus 3e-30 137
ENSMUST00000106026 2210404O09Rik-201 protein_coding Mus_musculus 3e-30 137
ENSMUST00000190066 2210404O09Rik-001 protein_coding Mus_musculus 3e-30 137
ENSMUST00000180507 Zfp493-003 retained_intron Mus_musculus 4e-29 134
ENSMUST00000164936 Zfp493-001 protein_coding Mus_musculus 4e-29 134
ENSMUST00000180014 Gm13242-201 protein_coding Mus_musculus 4e-29 134
ENSMUST00000055349 Zfp943-001 protein_coding Mus_musculus 2e-28 132
ENSMUST00000179777 Gm19965-001 protein_coding Mus_musculus 6e-28 130
ENSMUST00000072940 Gm5581-001 protein_coding Mus_musculus 2e-27 128
ENSMUST00000092720 5430403G16Rik-001 protein_coding Mus_musculus 7e-27 126
ENSMUST00000088787 Zfp948-201 protein_coding Mus_musculus 3e-26 124
ENSMUST00000154154 Gm13145-001 protein_coding Mus_musculus 3e-26 124
ENSMUST00000080249 Zfp947-001 protein_coding Mus_musculus 3e-25 121
ENSMUST00000187241 Zfp932-201 protein_coding Mus_musculus 4e-24 117
ENSMUST00000112536 Zfp932-003 protein_coding Mus_musculus 4e-24 117
ENSMUST00000112540 Zfp932-001 protein_coding Mus_musculus 4e-24 117
ENSMUST00000112544 Gm15446-001 protein_coding Mus_musculus 4e-24 117
ENSMUST00000182210 Gm6600-001 unprocessed_pseudogene Mus_musculus 6e-23 113
ENSMUST00000076195 Zfp935-201 protein_coding Mus_musculus 6e-23 113
ENSMUST00000182441 Gm27013-001 unprocessed_pseudogene Mus_musculus 3e-21 108
ENSMUST00000072133 Gm10226-201 protein_coding Mus_musculus 3e-21 108
ENSMUST00000039726 3110052M02Rik-201 protein_coding Mus_musculus 3e-20 104
ENSMUST00000098509 AW146154-001 protein_coding Mus_musculus 1e-19 102
ENSMUST00000071804 AI987944-001 protein_coding Mus_musculus 4e-19 100
ENSMUST00000163475 2610021A01Rik-001 protein_coding Mus_musculus 2e-18 99
ENSMUST00000099449 Zfp808-001 protein_coding Mus_musculus 3e-16 92
ENSMUST00000073201 Zfp958-201 protein_coding Mus_musculus 9e-16 90
ENSMUST00000122407 Gm12591-001 unprocessed_pseudogene Mus_musculus 0.000000000000003 88
ENSMUST00000112547 4930522L14Rik-002 protein_coding Mus_musculus 0.00000000000004 84
ENSMUST00000174558 Gm2381-001 protein_coding Mus_musculus 0.00000000000004 84
ENSMUST00000179346 Gm21060-201 protein_coding Mus_musculus 0.000000000002 79
ENSMUST00000167969 Gm17655-201 protein_coding Mus_musculus 0.000000000007 77
ENSMUST00000160457 Zfp945-201 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000088696 Zfp945-001 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000095615 Zfp945-004 retained_intron Mus_musculus 0.000000001 69
ENSMUST00000167516 Gm5141-201 protein_coding Mus_musculus 0.000000001 69

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