C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: archain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614498 ARCN1-201 ENSG00000095139 9606 + 11:118572424-118602927 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverOvaryENST00000614498
Transcript ID Brain Breast Heart Liver Ovary
ENST00000614498 4.352±0.00 5.004±0.24 7.506±0.00 5.287±0.00 7.185±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081E CIL_00081E_0001 VISTA 11:118137591-118740525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006810 IEA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150160 Arcn1-002 retained_intron Mus_musculus 0 789
ENSMUST00000034607 Arcn1-001 protein_coding Mus_musculus 0 789
ENSMUST00000173427 Gm8752-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000173278 Gm8750-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000125164 Arcn1-003 processed_transcript Mus_musculus 0 545
ENSDART00000014666 arcn1a-001 protein_coding Danio_rerio 0 311

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