C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614561 RP4-744I24.4-001 ENSG00000275550 9606 - 6:37295584-37295742 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaTestisENST00000614561
Transcript ID Muscle Placenta Testis
ENST00000614561 0.619±0.00 0.699±0.00 0.087±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089L CIL_00089L_0001 VISTA 6:36799205-37399713
CIL_0005CY CIL_0005CY_0001 CGP 6:37212180-37332970
CIL_0005CZ CIL_0005CZ_0001 CGP 6:37257772-37394738

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000136800 Ier3ip1-002 processed_transcript Mus_musculus 0 204
ENSMUST00000026487 Ier3ip1-001 protein_coding Mus_musculus 0 204
ENSMUST00000152369 Ier3ip1-004 retained_intron Mus_musculus 0 202
ENSMUST00000128679 Ier3ip1-003 retained_intron Mus_musculus 8e-36 152
ENSMUST00000142456 Hdhd2-007 nonsense_mediated_decay Mus_musculus 8e-36 152
ENSMUST00000120422 Gm13787-001 processed_pseudogene Mus_musculus 3e-20 100

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