C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: breast carcinoma amplified sequence 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614888 BCAS3-202 ENSG00000141376 9606 + 17:60677889-61084567 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungOvaryENST00000614888
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary
ENST00000614888 1.871±0.00 1.738±0.00 3.833±0.00 2.308±0.00 1.263±0.00 0.875±0.00 1.084±0.00 3.826±0.00 1.601±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000569 CIL_000569_0002 CGP 17:60600183-61392838
CIL_000703 CIL_000703_0001 CGP 17:60677453-61409466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092821 Bcas3-202 protein_coding Mus_musculus 0 2966
ENSMUST00000154396 Bcas3-004 protein_coding Mus_musculus 0 2141
ENSMUST00000108062 Bcas3-002 protein_coding Mus_musculus 0 2089
ENSMUST00000074875 Bcas3-201 protein_coding Mus_musculus 0 2087
ENSMUST00000108061 Bcas3-001 protein_coding Mus_musculus 0 2060
ENSMUST00000108056 Bcas3-003 protein_coding Mus_musculus 0 1897
ENSMUST00000092822 Bcas3-006 protein_coding Mus_musculus 0 1105
ENSMUST00000142596 Bcas3-005 protein_coding Mus_musculus 0 881
ENSMUST00000144276 Bcas3-012 protein_coding Mus_musculus 0 636
ENSMUST00000138423 Bcas3-014 protein_coding Mus_musculus 0 204
ENSMUST00000140215 Bcas3-013 processed_transcript Mus_musculus 7e-28 130

Loading