C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCCH-type containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000615791 ZC3H8-202 ENSG00000144161 9606 - 2:112215876-112255025 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000615791
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000615791 0.605±0.00 0.779±0.00 0.976±0.30 1.100±0.00 0.727±0.00 1.863±0.00 0.193±0.00 0.644±0.00 0.441±0.14 6.580±2.41 0.857±0.25 2.928±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047V CIL_00047V_0001 CGP 2:112138385-112255136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0006915 IEA apoptotic process
GO:0008023 IDA transcription elongation factor complex
GO:0015030 IDA Cajal body
GO:0033085 IMP negative regulation of T cell differentiation in thymus
GO:0035327 IDA transcriptionally active chromatin
GO:0035363 IDA histone locus body
GO:0042795 IMP snRNA transcription from RNA polymerase II promoter
GO:0042796 IMP snRNA transcription from RNA polymerase III promoter
GO:0043029 IMP T cell homeostasis
GO:0043565 ISS sequence-specific DNA binding
GO:0044822 IDA poly(A) RNA binding
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045945 IMP positive regulation of transcription from RNA polymerase III promoter
GO:0046677 IDA response to antibiotic
GO:0046872 IEA metal ion binding
GO:0070245 IMP positive regulation of thymocyte apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028866 Zc3h8-001 protein_coding Mus_musculus 0 752

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