C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | LIM homeobox 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000616237  |
LHX1-003 |
ENSG00000273706 |
9606 | + |
17:36938460-36941394  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00085R | CIL_00085R_0001 | VISTA | 17:36355391-36956100 |
| CIL_0007YB | CIL_0007YB_0001 | VISTA | 17:36401446-37002205 |
| CIL_0007YB | CIL_0007YB_0003 | VISTA | 17:36402232-37002285 |
| CIL_0005HV | CIL_0005HV_0002 | CGP | 17:36601572-36944612 |
| CIL_00085Q | CIL_00085Q_0001 | VISTA | 17:36672050-37272645 |
| CIL_00085M | CIL_00085M_0001 | VISTA | 17:36678794-37279927 |
| CIL_0008DP | CIL_0008DP_0001 | VISTA | 17:36790335-37391543 |
| CIL_0008GS | CIL_0008GS_0001 | VISTA | 17:36817120-37418221 |
| CIL_0007ND | CIL_0007ND_005J | UCNEbase | 17:36935930-36936894 |
| CIL_0005HW | CIL_0005HW_0002 | CGP | 17:36936785-37056871 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000184646
|
Lhx1-004 | protein_coding | Mus_musculus | 0 | 599 |
|
ENSMUST00000018842
|
Lhx1-001 | protein_coding | Mus_musculus | 0 | 599 |
|
ENSMUST00000092827
|
Lhx1-002 | protein_coding | Mus_musculus | 0 | 398 |
|
ENSDART00000021159
|
lhx1b-001 | protein_coding | Danio_rerio | 0 | 309 |
