C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tumor protein, translationally-controlled 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000616577 TPT1-201 ENSG00000133112 9606 - 13:45333471-45341284 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005654 IEA nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005771 IDA multivesicular body
GO:0006816 IC calcium ion transport
GO:0006874 IC cellular calcium ion homeostasis
GO:0008134 IEA transcription factor binding
GO:0009615 IEP response to virus
GO:0019827 IEA stem cell maintenance
GO:0042981 NAS regulation of apoptotic process
GO:0043066 TAS negative regulation of apoptotic process
GO:0044822 IDA poly(A) RNA binding
GO:0045298 IDA tubulin complex
GO:0070062 IDA extracellular vesicular exosome
GO:1902230 IMP negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
GO:2000384 IEA negative regulation of ectoderm development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110894 Tpt1-001 protein_coding Mus_musculus 0 822
ENSMUST00000121046 Tpt1-ps3-001 processed_pseudogene Mus_musculus 0 676
ENSMUST00000121768 Tpt1-ps6-001 processed_pseudogene Mus_musculus 0 636
ENSMUST00000112150 Tpt1-ps5-201 processed_pseudogene Mus_musculus 0 627
ENSMUST00000154533 Tpt1-006 retained_intron Mus_musculus 0 545
ENSMUST00000134040 Tpt1-005 processed_transcript Mus_musculus 0 525
ENSMUST00000142061 Tpt1-002 protein_coding Mus_musculus 0 521
ENSMUST00000150047 Tpt1-003 retained_intron Mus_musculus 0 455
ENSMUST00000128889 Tpt1-004 retained_intron Mus_musculus 0 222

Loading