C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aggrecan
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617301 ACAN-202 ENSG00000157766 9606 + 15:88803443-88875354 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000617301
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000617301 0.042±0.00 0.558±0.00 0.110±0.00 0.191±0.00 0.019±0.00 0.175±0.00 1.261±0.00 0.186±0.00 0.677±0.00 0.732±0.40 0.253±0.12 0.816±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011K CIL_00011K_0001 CGP 15:88636153-88875354
CIL_00011L CIL_00011L_0001 CGP 15:88803443-88895626

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005540 IEA hyaluronic acid binding
GO:0007155 IEA cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032835 Acan-201 protein_coding Mus_musculus 0 2316

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