C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glypican 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617456 GPC6-201 ENSG00000183098 9606 + 13:94286348-94403217 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000617456
Transcript ID Heart
ENST00000617456 0.524±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002EC CIL_0002EC_0001 CGP 13:91398675-94407401
CIL_0000E8 CIL_0000E8_0001 CGP 13:93226842-94479682

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005578 IEA proteinaceous extracellular matrix
GO:0016020 IEA membrane
GO:0043395 IEA heparan sulfate proteoglycan binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078849 Gpc6-001 protein_coding Mus_musculus 0 976
ENSMUST00000088483 Gpc6-004 protein_coding Mus_musculus 0 976
ENSMUST00000125435 Gpc6-002 protein_coding Mus_musculus 0 593

Loading