| Transcript ID | Colon | Ovary | Placenta | Testis |
|---|---|---|---|---|
| ENST00000617757 | 49.632±0.00 | 126.848±0.00 | 102.423±0.00 | 83.383±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | TAR DNA binding protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000617757  |
TARDBP-028 |
ENSG00000120948 |
9606 | + |
1:11023323-11024152  |
processed_transcript |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00082Y | CIL_00082Y_0001 | VISTA | 1:10421182-11021687 |
| CIL_0008S2 | CIL_0008S2_0001 | VISTA | 1:10435049-11039184 |
| CIL_0008RU | CIL_0008RU_0001 | VISTA | 1:10491513-11092116 |
| CIL_0008JG | CIL_0008JG_0001 | VISTA | 1:10565145-11165671 |
| CIL_0008JY | CIL_0008JY_0001 | VISTA | 1:10605072-11206087 |
| CIL_00019T | CIL_00019T_0002 | CGP | 1:10946471-11026420 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000105702
|
Tardbp-201 | protein_coding | Mus_musculus | 0 | 549 |
|
ENSMUST00000172073
|
Tardbp-203 | protein_coding | Mus_musculus | 0 | 549 |
|
ENSMUST00000165113
|
Tardbp-202 | protein_coding | Mus_musculus | 0 | 549 |
|
ENSMUST00000186711
|
Tardbp-025 | protein_coding | Mus_musculus | 0 | 549 |
|
ENSMUST00000105699
|
Tardbp-006 | protein_coding | Mus_musculus | 0 | 549 |
|
ENSMUST00000084125
|
Tardbp-001 | protein_coding | Mus_musculus | 0 | 549 |
|
ENSMUST00000190630
|
Tardbp-021 | protein_coding | Mus_musculus | 0 | 448 |
|
ENSMUST00000189048
|
Tardbp-012 | protein_coding | Mus_musculus | 0 | 215 |
|
ENSMUST00000190287
|
Tardbp-020 | nonsense_mediated_decay | Mus_musculus | 6e-37 | 158 |
|
ENSMUST00000191450
|
Tardbp-009 | nonsense_mediated_decay | Mus_musculus | 6e-37 | 158 |
|
ENSMUST00000191378
|
Tardbp-018 | nonsense_mediated_decay | Mus_musculus | 6e-37 | 158 |
|
ENSMUST00000140897
|
Tardbp-004 | nonsense_mediated_decay | Mus_musculus | 6e-37 | 158 |
|
ENSMUST00000190552
|
Tardbp-017 | nonsense_mediated_decay | Mus_musculus | 6e-37 | 158 |
|
ENSMUST00000147391
|
Tardbp-005 | nonsense_mediated_decay | Mus_musculus | 6e-37 | 158 |
|
ENSMUST00000045180
|
Tardbp-002 | nonsense_mediated_decay | Mus_musculus | 6e-37 | 158 |
|
ENSMUST00000187937
|
Tardbp-028 | processed_transcript | Mus_musculus | 6e-37 | 158 |
|
ENSMUST00000188134
|
Tardbp-024 | nonsense_mediated_decay | Mus_musculus | 6e-37 | 158 |
