C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: N-ethylmaleimide-sensitive factor attachment protein, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617876 NAPB-203 ENSG00000125814 9606 - 20:23374519-23421519 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderOvaryPlacentaENST00000617876
Transcript ID Bladder Ovary Placenta
ENST00000617876 1.372±0.00 0.735±0.00 0.607±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MO CIL_0004MO_0002 CGP 20:23362182-23421519
CIL_00023K CIL_00023K_0001 CGP 20:23374519-23444930

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0010807 IEA regulation of synaptic vesicle priming
GO:0019905 IEA syntaxin binding
GO:0035249 IEA synaptic transmission, glutamatergic
GO:0035494 IEA SNARE complex disassembly
GO:0070044 IEA synaptobrevin 2-SNAP-25-syntaxin-1a complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028926 Napb-001 protein_coding Mus_musculus 0 1225
ENSMUST00000136513 Napb-002 nonsense_mediated_decay Mus_musculus 0 782
ENSMUST00000140647 Napb-003 retained_intron Mus_musculus 0 348

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