C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618040 KCNN3-201 ENSG00000143603 9606 - 1:154697474-154870278 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverLungOvaryPlacentaTestisENST00000618040
Transcript ID Adipose Adrenal Breast Colon Liver Lung Ovary Placenta Testis
ENST00000618040 0.062±0.00 0.355±0.00 0.188±0.00 0.747±0.00 0.013±0.00 0.373±0.12 0.144±0.03 0.012±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LU CIL_0000LU_0002 CGP 1:154582062-154870280

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005516 IEA calmodulin binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006813 IEA potassium ion transport
GO:0015269 IEA calcium-activated potassium channel activity
GO:0016021 IEA integral component of membrane
GO:0016286 IEA small conductance calcium-activated potassium channel activity
GO:0030175 IEA filopodium
GO:0031594 IEA neuromuscular junction
GO:0043005 IEA neuron projection
GO:0043025 IEA neuronal cell body
GO:0044297 IEA cell body
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000811 Kcnn3-001 protein_coding Mus_musculus 0 2165
ENSMUST00000124584 Kcnn3-002 retained_intron Mus_musculus 0 883
ENSDART00000088588 kcnn1b-201 protein_coding Danio_rerio 0 545
ENSDART00000132685 kcnn1b-001 protein_coding Danio_rerio 0 545
ENSDART00000142596 kcnn1b-003 protein_coding Danio_rerio 0 510
ENSDART00000141221 KCNN2-001 protein_coding Danio_rerio 0 302
ENSMUST00000183332 Rbm4b-007 retained_intron Mus_musculus 0.0002 55

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