C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cadherin 11, type 2, OB-cadherin (osteoblast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619158 CDH11-019 ENSG00000140937 9606 - 16:64984696-64988334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryTestisENST00000619158
Transcript ID Brain Lung Ovary Testis
ENST00000619158 0.649±0.00 1.932±0.00 2.717±0.00 0.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SB CIL_0006SB_0002 CGP 16:64943753-66404786

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000075190 Cdh11-201 protein_coding Mus_musculus 0 230
ENSMUST00000096485 Gm21811-001 unprocessed_pseudogene Mus_musculus 0 193
ENSMUST00000155660 Gm6483-003 processed_transcript Mus_musculus 5.60519e-45 187
ENSMUST00000139264 2610005L07Rik-002 transcribed_unprocessed_pseudogene Mus_musculus 1.00053e-42 180
ENSMUST00000150051 6820431F20Rik-003 transcribed_unprocessed_pseudogene Mus_musculus 6e-35 154

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