C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methyl CpG binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619732 MECP2-202 ENSG00000169057 9606 - X:154021813-154097731 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000619732
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000619732 7.396±0.00 8.605±0.00 3.485±2.33 2.719±1.04 2.858±2.02 2.400±1.40 2.758±2.20 1.433±0.68 2.666±1.19 1.696±1.20 3.613±2.50 1.306±0.38 4.280±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GC CIL_0007GC_0002 CGP X:154010500-154097755
CIL_0001LD CIL_0001LD_0001 CGP X:154021573-154159032

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100750 Mecp2-001 protein_coding Mus_musculus 0 2848
ENSMUST00000170481 Mecp2-201 protein_coding Mus_musculus 0 2723
ENSMUST00000033770 Mecp2-002 protein_coding Mus_musculus 0 2071
ENSMUST00000123362 Mecp2-003 protein_coding Mus_musculus 0 1419
ENSMUST00000140399 Mecp2-004 protein_coding Mus_musculus 0 846

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