C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | protocadherin gamma subfamily A, 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000619750  |
PCDHGA3-002 |
ENSG00000254245 |
9606 | + |
5:141343829-141346523  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000630 | CIL_000630_000Q | CGP | 5:141330571-141512981 |
| CIL_000630 | CIL_000630_000P | CGP | 5:141338760-141512979 |
| CIL_000630 | CIL_000630_0012 | CGP | 5:141343829-141512979 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005509 | IEA | calcium ion binding |
| GO:0005886 | IEA | plasma membrane |
| GO:0007156 | IEA | homophilic cell adhesion via plasma membrane adhesion molecules |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000073447
|
Pcdhga12-207 | protein_coding | Mus_musculus | 0 | 2043 |
|
ENSMUST00000044851
|
Pcdhga12-202 | protein_coding | Mus_musculus | 0 | 1009 |
