C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620194 TRIM24-201 ENSG00000122779 9606 + 7:138460549-138584951 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverMuscleOvaryENST00000620194
Transcript ID Brain Colon Heart Kidney Liver Muscle Ovary
ENST00000620194 1.712±0.00 1.229±0.00 0.396±0.00 2.559±0.00 1.963±0.00 1.328±0.00 3.685±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Q4 CIL_0002Q4_0001 CGP 7:138002324-138589993
CIL_0002Q3 CIL_0002Q3_0001 CGP 7:138460334-138701352

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120428 Trim24-002 protein_coding Mus_musculus 0 3725
ENSMUST00000120238 Trim24-003 protein_coding Mus_musculus 0 1964
ENSMUST00000031859 Trim24-001 protein_coding Mus_musculus 0 1964
ENSMUST00000149828 Trim24-006 retained_intron Mus_musculus 0 1341
ENSMUST00000149561 Trim24-004 processed_transcript Mus_musculus 0 994
ENSMUST00000153004 Trim24-005 retained_intron Mus_musculus 0 510
ENSMUST00000135387 Trim24-008 retained_intron Mus_musculus 0 497
ENSMUST00000123007 Trim24-007 retained_intron Mus_musculus 0 366

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