C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, beta 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620391 ITGB6-201 ENSG00000115221 9606 - 2:160099667-160200313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverLungOvaryPlacentaENST00000620391
Transcript ID Kidney Liver Lung Ovary Placenta
ENST00000620391 0.022±0.00 0.003±0.00 2.413±0.00 1.153±1.20 1.769±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TX CIL_0005TX_0001 CGP 2:159932006-160271888
CIL_0005TW CIL_0005TW_0001 CGP 2:160099666-160493794

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059888 Itgb6-002 protein_coding Mus_musculus 0 2342
ENSMUST00000028348 Itgb6-001 protein_coding Mus_musculus 0 2270
ENSMUST00000154764 Itgb6-004 protein_coding Mus_musculus 0 2158
ENSMUST00000112517 Itgb6-003 protein_coding Mus_musculus 0 2158
ENSMUST00000133887 Itgb6-006 processed_transcript Mus_musculus 0 937
ENSMUST00000151035 Itgb6-007 processed_transcript Mus_musculus 0 732

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