C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, T
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620410 PTPRT-203 ENSG00000196090 9606 - 20:42677866-42791467 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyENST00000620410
Transcript ID Breast Colon Kidney
ENST00000620410 0.720±0.00 0.325±0.00 0.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E5 CIL_0004E5_0001 CGP 20:41402101-43189970
CIL_0004E4 CIL_0004E4_0001 CGP 20:42072752-43464247

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109441 Ptprt-004 protein_coding Mus_musculus 0 1195
ENSMUST00000109442 Ptprt-002 protein_coding Mus_musculus 0 1195
ENSMUST00000109443 Ptprt-003 protein_coding Mus_musculus 0 1195
ENSMUST00000109445 Ptprt-001 protein_coding Mus_musculus 0 1195

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