C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dachshund family transcription factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620444 DACH1-202 ENSG00000276644 9606 - 13:71437966-71867192 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000620444
Transcript ID Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000620444 0.147±0.00 0.234±0.00 0.077±0.00 0.349±0.00 0.447±0.00 0.116±0.00 0.153±0.02 0.982±0.00 0.813±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VF CIL_0003VF_0001 CGP 13:69700594-71867192
CIL_0007L7 CIL_0007L7_0001 UCNEbase 13:70667313-71866528
CIL_0008WD CIL_0008WD_0001 VISTA 13:70848326-71450830
CIL_0008WC CIL_0008WC_0001 VISTA 13:70900716-71501236
CIL_000957 CIL_000957_0001 VISTA 13:70919290-71521202
CIL_000844 CIL_000844_0001 VISTA 13:70919510-71520241
CIL_0009B5 CIL_0009B5_0001 VISTA 13:71189244-71789684
CIL_0008M4 CIL_0008M4_0001 VISTA 13:71381704-71982907
CIL_0008M8 CIL_0008M8_0001 VISTA 13:71381958-71982706
CIL_000958 CIL_000958_0001 VISTA 13:71426717-72028802
CIL_0004PD CIL_0004PD_0002 CGP 13:71437966-72727687

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069334 Dach1-002 protein_coding Mus_musculus 0 2918
ENSMUST00000071533 Dach1-001 protein_coding Mus_musculus 0 2918
ENSMUST00000156684 Dach1-003 retained_intron Mus_musculus 0 1668
ENSDART00000101070 dachd-001 protein_coding Danio_rerio 0 405

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