C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: thyroid hormone receptor interactor 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620738 TRIP11-201 ENSG00000100815 9606 - 14:91969565-92040032 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000620738
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000620738 1.619±0.00 2.953±0.00 1.487±0.00 10.461±0.00 2.318±1.03 1.808±0.10 2.566±0.38 3.771±0.00 5.494±0.00 0.921±0.33 1.819±0.45 2.369±0.00 5.590±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LX CIL_0002LX_0002 CGP 14:91869412-92040896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0003735 IEA structural constituent of ribosome
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021605 Trip11-001 protein_coding Mus_musculus 0 5450
ENSMUST00000177183 Trip11-007 protein_coding Mus_musculus 0 4276
ENSMUST00000177536 Trip11-003 protein_coding Mus_musculus 0 1343
ENSMUST00000176728 Trip11-006 protein_coding Mus_musculus 0 743
ENSMUST00000177480 Trip11-004 nonsense_mediated_decay Mus_musculus 0 390
ENSMUST00000085086 Trip11-002 processed_transcript Mus_musculus 0 202

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