C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synapsin II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621198 SYN2-001 ENSG00000157152 9606 + 3:12004402-12191400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleOvaryPlacentaTestisENST00000621198
Transcript ID Lung Muscle Ovary Placenta Testis
ENST00000621198 0.551±0.00 0.578±0.00 0.578±0.14 1.496±0.25 3.839±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SM CIL_0005SM_0001 CGP 3:11790442-12191400
CIL_0004U7 CIL_0004U7_0002 CGP 3:12004402-12191400

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007269 IEA neurotransmitter secretion
GO:0030672 IEA synaptic vesicle membrane
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009538 Syn2-201 protein_coding Mus_musculus 0 2780
ENSMUST00000169345 Syn2-202 protein_coding Mus_musculus 0 1712

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