C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cell adhesion molecule 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621709 CADM1-205 ENSG00000182985 9606 - 11:115173626-115240421 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000621709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000621709 1.552±0.00 2.793±0.00 2.814±0.00 10.317±0.00 1.677±0.82 2.447±2.19 1.503±0.81 4.754±0.25 1.830±0.09 8.144±2.37 0.433±0.00 2.541±1.75 8.230±2.23 6.254±0.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JB CIL_0007JB_0003 UCNEbase 11:114879628-115317708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114547 Cadm1-003 protein_coding Mus_musculus 0 1934
ENSMUST00000085909 Cadm1-002 protein_coding Mus_musculus 0 1764
ENSMUST00000152459 Cadm1-004 protein_coding Mus_musculus 0 1367
ENSMUST00000124073 Cadm1-007 retained_intron Mus_musculus 0 1365
ENSMUST00000034581 Cadm1-006 protein_coding Mus_musculus 0 1219
ENSMUST00000143026 Cadm1-005 protein_coding Mus_musculus 0 1219
ENSMUST00000114548 Cadm1-001 protein_coding Mus_musculus 0 1218
ENSMUST00000151624 Cadm1-008 processed_transcript Mus_musculus 0 1216
ENSMUST00000148925 Cadm1-009 retained_intron Mus_musculus 0 211

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