C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy chain 13, skeletal muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621918 MYH13-201 ENSG00000006788 9606 - 17:10300866-10364544 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverMuscleOvaryPlacentaTestisENST00000621918
Transcript ID Adipose Adrenal Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000621918 0.014±0.00 0.031±0.00 0.023±0.00 0.052±0.00 0.026±0.00 0.029±0.00 0.008±0.00 0.018±0.01 0.289±0.07 0.108±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 TAS microfilament motor activity
GO:0003774 IEA motor activity
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005859 TAS muscle myosin complex
GO:0006936 TAS muscle contraction
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex
GO:0032982 IEA myosin filament
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180845 Myh13-002 protein_coding Mus_musculus 0 7393
ENSMUST00000108684 Myh13-001 protein_coding Mus_musculus 0 7393
ENSMUST00000081911 Myh13-201 protein_coding Mus_musculus 0 7324
ENSMUST00000019625 Myh8-001 protein_coding Mus_musculus 0 4189
ENSMUST00000170942 Myh4-201 protein_coding Mus_musculus 0 4071
ENSMUST00000018632 Myh4-001 protein_coding Mus_musculus 0 4071
ENSMUST00000075734 Myh1-201 protein_coding Mus_musculus 0 4056
ENSMUST00000018637 Myh1-003 protein_coding Mus_musculus 0 4056
ENSMUST00000124516 Myh1-001 protein_coding Mus_musculus 0 4056
ENSMUST00000170159 Myh2-201 protein_coding Mus_musculus 0 4034
ENSMUST00000018641 Myh2-001 protein_coding Mus_musculus 0 4034
ENSMUST00000165221 Myh3-202 protein_coding Mus_musculus 0 3546
ENSMUST00000007301 Myh3-201 protein_coding Mus_musculus 0 3546
ENSMUST00000108689 Myh3-001 protein_coding Mus_musculus 0 3546
ENSDART00000051362 myhc4-201 protein_coding Danio_rerio 0 3155
ENSDART00000125917 myhc4-001 protein_coding Danio_rerio 0 3144
ENSDART00000051361 myhz2-201 protein_coding Danio_rerio 0 3061
ENSDART00000126873 myhz2-001 protein_coding Danio_rerio 0 3061
ENSDART00000122889 myhz1.3-001 protein_coding Danio_rerio 0 3061
ENSDART00000051360 MYH13 (3 of 10)-201 protein_coding Danio_rerio 0 3044
ENSMUST00000168485 Myh7-201 protein_coding Mus_musculus 0 3029
ENSMUST00000102803 Myh7-001 protein_coding Mus_musculus 0 3029
ENSDART00000098060 myhz1.1-201 protein_coding Danio_rerio 0 3027
ENSDART00000123003 myhz1.1-001 protein_coding Danio_rerio 0 3027
ENSDART00000098067 myhz1.2-201 protein_coding Danio_rerio 0 3020
ENSDART00000131983 myhz1.2-001 protein_coding Danio_rerio 0 3020
ENSDART00000098072 myhz1.1-202 protein_coding Danio_rerio 0 3013
ENSDART00000139917 myha-001 protein_coding Danio_rerio 0 3011
ENSDART00000109263 myhz1.1-203 protein_coding Danio_rerio 0 2972
ENSDART00000156295 myhb-001 protein_coding Danio_rerio 0 2817
ENSDART00000026257 myhb-201 protein_coding Danio_rerio 0 2811
ENSDART00000123920 MYH13 (5 of 10)-202 protein_coding Danio_rerio 0 2466
ENSDART00000150162 si:ch211-24n20.3-001 protein_coding Danio_rerio 0 2435
ENSDART00000135233 si:ch211-24n20.3-201 protein_coding Danio_rerio 0 2396
ENSMUST00000108686 Myh8-002 retained_intron Mus_musculus 0 2375
ENSDART00000137082 CU633479.6-201 protein_coding Danio_rerio 0 2374
ENSDART00000056849 smyhc2-001 protein_coding Danio_rerio 0 2311
ENSMUST00000081857 Myh6-201 protein_coding Mus_musculus 0 2126
ENSMUST00000145322 Myh6-001 protein_coding Mus_musculus 0 1866
ENSDART00000130531 myhz1.3-202 protein_coding Danio_rerio 0 1535
ENSDART00000135295 MYH13 (9 of 10)-201 protein_coding Danio_rerio 0 1535
ENSDART00000128784 vmhcl-001 protein_coding Danio_rerio 0 1530
ENSDART00000056853 smyhc1-203 protein_coding Danio_rerio 0 1472
ENSDART00000075210 protein_coding Danio_rerio 0 1415
ENSDART00000137989 CU633479.5-201 protein_coding Danio_rerio 0 1356
ENSDART00000133338 CR450736.2-201 protein_coding Danio_rerio 0 1339
ENSDART00000066527 smyhc3-201 protein_coding Danio_rerio 0 1339
ENSDART00000150060 smyhc3-001 protein_coding Danio_rerio 0 1339
ENSDART00000099532 vmhc-001 protein_coding Danio_rerio 0 1158
ENSDART00000078958 vmhcl-201 protein_coding Danio_rerio 0 1061
ENSDART00000045928 smyhc1-202 protein_coding Danio_rerio 0 1024
ENSDART00000004536 smyhc1-201 protein_coding Danio_rerio 0 1014
ENSDART00000130036 MYH13 (5 of 10)-201 protein_coding Danio_rerio 0 996
ENSMUST00000139052 Myh8-004 retained_intron Mus_musculus 0 920
ENSMUST00000181027 Myh13-004 protein_coding Mus_musculus 0 789
ENSDART00000127125 myhz1.3-201 protein_coding Danio_rerio 0 571
ENSMUST00000108685 Myh8-003 protein_coding Mus_musculus 0 420
ENSDART00000123565 vmhcl-004 protein_coding Danio_rerio 0 342
ENSDART00000141922 vmhcl-002 protein_coding Danio_rerio 0 219
ENSMUST00000124337 Myh2-003 retained_intron Mus_musculus 0 200
ENSMUST00000129018 Myh1-002 protein_coding Mus_musculus 5e-18 99
ENSMUST00000151525 Myo1b-004 retained_intron Mus_musculus 0.0000000000005 82
ENSMUST00000144694 Myo1b-006 protein_coding Mus_musculus 0.0000000000005 82
ENSMUST00000018561 Myo1b-002 protein_coding Mus_musculus 0.0000000000005 82
ENSMUST00000114541 Myo1b-013 protein_coding Mus_musculus 0.0000000000005 82
ENSMUST00000114537 Myo1b-003 protein_coding Mus_musculus 0.0000000000005 82
ENSMUST00000046390 Myo1b-001 protein_coding Mus_musculus 0.0000000000005 82
ENSMUST00000135125 Myo1b-007 processed_transcript Mus_musculus 0.000000001 71

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