C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Myb-like, SWIRM and MPN domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622766 MYSM1-201 ENSG00000162601 9606 - 1:58654751-58668483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000622766
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000622766 0.382±0.00 1.175±0.00 1.031±0.00 0.121±0.00 1.511±0.00 0.565±0.00 1.452±0.34 1.560±0.97 0.259±0.10 0.836±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N6 CIL_0001N6_0001 CGP 1:58654739-58784327

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0003713 IDA transcription coactivator activity
GO:0004221 IDA ubiquitin thiolesterase activity
GO:0004843 IDA ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006338 IMP chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006508 IEA proteolysis
GO:0008237 IMP metallopeptidase activity
GO:0032403 IDA protein complex binding
GO:0035522 IMP monoubiquitinated histone H2A deubiquitination
GO:0042393 IDA histone binding
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124820 Mysm1-003 processed_transcript Mus_musculus 0 987
ENSMUST00000075872 Mysm1-001 protein_coding Mus_musculus 0 946
ENSMUST00000125427 Mysm1-004 processed_transcript Mus_musculus 0 525

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