C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: alpha thalassemia/mental retardation syndrome X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000623242 ATRX-016 ENSG00000085224 9606 - X:77633353-77652276 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000623242
Transcript ID Ovary Placenta Testis
ENST00000623242 26.570±0.00 34.209±0.00 26.433±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001YN CIL_0001YN_0001 CGP X:77447405-77786269
CIL_0001YT CIL_0001YT_0001 CGP X:77504878-77895593

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113573 Atrx-001 protein_coding Mus_musculus 0 614
ENSMUST00000142235 Atrx-007 retained_intron Mus_musculus 0 403
ENSMUST00000146193 Atrx-006 retained_intron Mus_musculus 0 300

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