C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SRY-box containing gene 9a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003293 sox9a 7955 - 12:2151822-2157414 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000005676 sox9a-001 2153723-2157363 protein_coding
  ENSDART00000127937 sox9a-201 2151822-2157414 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000005676ENSDART00000127937
Transcript ID Heart Kidney Liver Muscle
ENSDART00000005676 1.136±1.08 0.084±0.00 0.047±0.00 2.098±0.00
ENSDART00000127937 N/A 0.159±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IMP cytoplasm
GO:0030916 IGI otic vesicle formation
GO:0033339 IMP pectoral fin development
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0043049 IGI otic placode formation
GO:0048708 IMP astrocyte differentiation
GO:0048709 IMP oligodendrocyte differentiation
GO:0048839 IMP inner ear development
GO:0051216 IMP cartilage development
GO:0060536 IMP cartilage morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000125398 SOX9 SRY (sex determining region Y)-box 9 protein_coding Homo_sapiens
ENSMUSG00000000567 Sox9 SRY (sex determining region Y)-box 9 protein_coding Mus_musculus

Loading