C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor subfamily 1, group D, member 2a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000003820 nr1d2a 7955 + 16:53625489-53636413 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000099040 nr1d2a-201 53625489-53634830 protein_coding
  ENSDART00000128167 nr1d2a-001 53626439-53636413 protein_coding
  ENSDART00000148588 nr1d2a-002 53626439-53627930 retained_intron
  ENSDART00000153675 nr1d2a-202 53626422-53634830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000099040ENSDART00000128167
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000099040 10.656±0.00 N/A N/A 7.722±0.00 16.736±0.00
ENSDART00000128167 54.435±21.44 79.609±52.17 80.763±1.57 2.233±0.00 18.885±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004887 IEA thyroid hormone receptor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000174738 NR1D2 nuclear receptor subfamily 1, group D, member 2 protein_coding Homo_sapiens
ENSMUSG00000021775 Nr1d2 nuclear receptor subfamily 1, group D, member 2 protein_coding Mus_musculus

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