C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: forkhead box R1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000004864 FOXR1 7955 + 5:60147744-60153128 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000019561 FOXR1-201 60147744-60153128 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000019561
Transcript ID Brain Heart Kidney Liver
ENSDART00000019561 0.170±0.07 0.103±0.00 2.733±0.00 0.096±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021U CIL_00021U_0001 CGP 5:60147744-60164937

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IBA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003690 IBA double-stranded DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003705 IBA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity
GO:0005667 IBA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0007389 IBA pattern specification process
GO:0008134 IBA transcription factor binding
GO:0008301 IBA DNA binding, bending
GO:0009790 IBA embryo development
GO:0009888 IBA tissue development
GO:0043565 IEA sequence-specific DNA binding
GO:0048513 IBA organ development
GO:0051090 IBA regulation of sequence-specific DNA binding transcription factor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000176302 FOXR1 forkhead box R1 protein_coding Homo_sapiens
ENSG00000189299 FOXR2 forkhead box R2 protein_coding Homo_sapiens
ENSMUSG00000071665 Foxr2 forkhead box R2 protein_coding Mus_musculus
ENSMUSG00000074397 Foxr1 forkhead box R1 protein_coding Mus_musculus

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