C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: anterior pharynx defective 1B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000005612 aph1b 7955 + 7:30513432-30523444 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000008096 aph1b-001 30513699-30523444 protein_coding
  ENSDART00000145129 aph1b-003 30518584-30519235 retained_intron
  ENSDART00000146655 aph1b-002 30513432-30519252 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000008096ENSDART00000146655
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000008096 8.335±3.19 6.633±4.63 5.462±4.79 3.117±0.00 6.089±0.00
ENSDART00000146655 N/A N/A N/A 1.420±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007219 IEA Notch signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016485 IEA protein processing
GO:0043085 IEA positive regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000138613 APH1B APH1B gamma secretase subunit protein_coding Homo_sapiens
ENSMUSG00000032375 Aph1b anterior pharynx defective 1b homolog (C. elegans) protein_coding Mus_musculus
ENSMUSG00000053040 Aph1c anterior pharynx defective 1c homolog (C. elegans) protein_coding Mus_musculus

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