C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000006181 hif1aa 7955 + 13:31992125-32007265 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000044282 hif1aa-201 31992125-32007188 protein_coding
  ENSDART00000144328 hif1aa-002 31993423-32001128 nonsense_mediated_decay
  ENSDART00000147222 hif1aa-001 31993411-32007265 protein_coding

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000044282ENSDART00000144328ENSDART00000147222
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000044282 N/A N/A N/A 0.044±0.00 N/A
ENSDART00000144328 N/A N/A 2.641±1.86 N/A N/A
ENSDART00000147222 2.490±0.00 2.027±0.00 N/A 0.028±0.00 1.944±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006H CIL_00006H_0001 CGP 13:31940422-32007265

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007165 IEA signal transduction
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100644 HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) protein_coding Homo_sapiens
ENSMUSG00000021109 Hif1a hypoxia inducible factor 1, alpha subunit protein_coding Mus_musculus

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