C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00006H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000018382-ENSDARG00000006181 CGP 7955 13:31940422-32007265
GeneTranscriptPositionBiotype
ENSDARG00000006181 (hif1aa)
hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) a
ENSDART00000044282 (hif1aa-201) 31992125-32007188 protein_coding
ENSDART00000144328 (hif1aa-002) 31993423-32001128 nonsense_mediated_decay
ENSDART00000147222 (hif1aa-001) 31993411-32007265 protein_coding
ENSDARG00000018382 (prkcha)
protein kinase C, eta, a
ENSDART00000034745 (prkcha-001) 31940422-31972572 protein_coding
CIL_00006H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021108-ENSMUSG00000021109 CGP 10090 12:73584797-73947530
GeneTranscriptPositionBiotype
ENSMUSG00000021108 (Prkch)
protein kinase C, eta
ENSMUST00000021527 (Prkch-001) 73584797-73778185 protein_coding
ENSMUST00000119092 (Prkch-002) 73584843-73761542 protein_coding
ENSMUSG00000021109 (Hif1a)
hypoxia inducible factor 1, alpha subunit
ENSMUST00000021530 (Hif1a-001) 73907904-73947530 protein_coding
ENSMUST00000110461 (Hif1a-003) 73901375-73947530 protein_coding
ENSMUST00000110464 (Hif1a-002) 73907904-73933076 protein_coding
ENSMUST00000149740 (Hif1a-004) 73926602-73928532 retained_intron
ENSMUST00000157041 (Hif1a-005) 73937670-73939881 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006H_0001ENSDARG00000006181ENSDART00000044282ENSDART00000144328ENSDART00000147222ENSDARG00000018382ENSDART00000034745CIL_00006H_0002ENSMUSG00000021108ENSMUST00000021527ENSMUST00000119092ENSMUSG00000021109ENSMUST00000021530ENSMUST00000110461ENSMUST00000110464ENSMUST00000149740ENSMUST00000157041
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00006H_0001ENSDARG00000006181ENSDART00000044282ENSDART00000144328ENSDART00000147222ENSDARG00000018382ENSDART00000034745CIL_00006H_0002ENSMUSG00000021108ENSMUST00000021527ENSMUST00000119092ENSMUSG00000021109ENSMUST00000021530ENSMUST00000110461ENSMUST00000110464ENSMUST00000149740
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006181 ENSDART00000044282 N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A
ENSDART00000144328 N/A N/A N/A N/A N/A N/A N/A 2.641±1.86 N/A N/A N/A N/A N/A N/A
ENSDART00000147222 N/A N/A N/A 2.490±0.00 N/A N/A 2.027±0.00 N/A 0.028±0.00 N/A 1.944±0.00 N/A N/A N/A
ENSDARG00000018382 ENSDART00000034745 N/A N/A N/A 0.230±0.14 N/A N/A 1.211±0.23 3.893±0.15 0.122±0.00 N/A 0.402±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021108 ENSMUST00000021527 7.273±1.10 1.853±0.39 7.219±2.38 2.276±0.24 8.937±1.81 2.721±0.53 4.875±0.25 4.662±0.22 0.993±0.44 24.467±1.31 2.072±0.36 3.217±0.89 15.356±5.44 0.411±0.16
ENSMUST00000119092 N/A 0.611±0.17 N/A 0.386±0.00 1.231±0.00 N/A N/A N/A 0.090±0.00 N/A N/A 0.646±0.13 N/A 0.162±0.12
ENSMUSG00000021109 ENSMUST00000021530 12.999±3.20 4.616±0.99 12.202±0.13 14.853±7.16 11.320±3.22 9.878±2.81 7.359±0.75 9.170±1.20 4.147±1.42 8.734±1.02 1.811±0.55 15.800±4.84 20.150±7.95 1.894±0.56
ENSMUST00000110461 N/A N/A 6.369±0.00 3.755±0.15 3.330±0.00 N/A 1.451±0.13 N/A 1.709±0.35 N/A 1.015±0.42 10.459±0.05 12.880±4.47 0.627±0.00
ENSMUST00000110464 N/A 13.319±0.00 N/A N/A 29.875±0.96 28.821±8.54 N/A 3.901±0.00 N/A 3.333±0.00 N/A 55.367±17.80 N/A N/A
ENSMUST00000149740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 70.239±0.00 78.657±26.70 N/A
ENSMUST00000157041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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