C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: secretory carrier membrane protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000010279 scamp2 7955 - 25:2982084-3001076 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000053405 scamp2-001 2982084-3001076 protein_coding
  ENSDART00000073618 scamp2-201 2982086-3001049 protein_coding
  ENSDART00000148374 scamp2-004 2982986-2991535 retained_intron
  ENSDART00000148466 scamp2-002 2982578-3001076 nonsense_mediated_decay
  ENSDART00000148694 scamp2-003 2985610-2993495 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000053405ENSDART00000073618ENSDART00000148374ENSDART00000148466ENSDART00000148694
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000053405 N/A 8.892±1.09 10.248±0.00 N/A N/A
ENSDART00000073618 4.979±2.07 7.946±1.75 20.424±0.86 3.017±0.00 6.367±0.00
ENSDART00000148374 N/A 10.075±0.00 17.803±0.00 N/A N/A
ENSDART00000148466 2.369±0.00 4.178±0.00 N/A N/A N/A
ENSDART00000148694 4.313±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AU CIL_0005AU_0001 CGP 25:2982084-3014052

Gene Ontology
GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000140497 SCAMP2 secretory carrier membrane protein 2 protein_coding Homo_sapiens
ENSMUSG00000040188 Scamp2 secretory carrier membrane protein 2 protein_coding Mus_musculus

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