C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sp9 transcription factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000010462 sp9 7955 - 9:2590375-2592972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000024806 sp9-201 2590375-2592972 protein_coding
  ENSDART00000128977 sp9-202 2590375-2592918 protein_coding
  ENSDART00000137602 sp9-001 2590900-2592972 protein_coding
  ENSDART00000139059 sp9-002 2590900-2592918 retained_intron

Danio rerio EnsemblZv9

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Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000024806ENSDART00000137602ENSDART00000139059
Transcript ID Brain Heart Kidney Muscle
ENSDART00000024806 4.961±2.15 N/A 0.147±0.00 0.283±0.00
ENSDART00000137602 N/A 0.049±0.00 N/A N/A
ENSDART00000139059 N/A 0.033±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0030326 IMP embryonic limb morphogenesis
GO:0035118 IMP embryonic pectoral fin morphogenesis
GO:0045743 IMP positive regulation of fibroblast growth factor receptor signaling pathway
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000217236 SP9 Sp9 transcription factor protein_coding Homo_sapiens
ENSMUSG00000068859 Sp9 trans-acting transcription factor 9 protein_coding Mus_musculus

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