C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: syndecan binding protein (syntenin) 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000012513 sdcbp2 7955 - 23:16819339-16852904 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000020810 sdcbp2-001 16819339-16852904 protein_coding
  ENSDART00000136496 sdcbp2-002 16822802-16837358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000020810ENSDART00000136496
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000020810 31.198±22.95 28.582±8.78 16.858±6.28 5.156±0.00 18.442±0.00
ENSDART00000136496 N/A N/A N/A N/A 17.560±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000012 CIL_000012_0001 CGP 23:16802135-16852904

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IDA response to hypoxia
GO:0005515 IEA protein binding
GO:0043325 IDA phosphatidylinositol-3,4-bisphosphate binding
GO:0045545 IDA syndecan binding
GO:0055113 IGI epiboly involved in gastrulation with mouth forming second

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000125775 SDCBP2 syndecan binding protein (syntenin) 2 protein_coding Homo_sapiens
ENSMUSG00000027456 Sdcbp2 syndecan binding protein (syntenin) 2 protein_coding Mus_musculus

Loading